PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.F1H86
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 139aa    MW: 15005 Da    PI: 10.2759
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.F1H86genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.22e-05100124529
                  HHHHHHHHHHHHHHHHHHHHCTSCC CS
          HLH   5 hnerErrRRdriNsafeeLrellPk 29 
                  h+++Er R +ri +++  L+el+P+
  Araip.F1H86 100 HSIAERLRKERIAERIRALQELVPS 124
                  99**********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.04E-693127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.91595139IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.1E-696127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    Send to blast
PSSRGIYLRE ATAFQQSTEL GLSLDQGKGA DGAAAPGVGF LKPPEEASGS GKRFRDDVLD  60
ARAKNVFHGQ PMPTTIPAAP HPPTMRPRVR ARRGQATDPH SIAERLRKER IAERIRALQE  120
LVPSVNKVCN CSNAVCDPL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016207334.13e-72PREDICTED: transcription factor UNE12-like
SwissprotO227682e-33UNE12_ARATH; Transcription factor UNE12
TrEMBLI1N9L83e-46I1N9L8_SOYBN; Uncharacterized protein
STRINGGLYMA19G34360.19e-46(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.37e-28bHLH family protein